3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14159

Details:

PFam ID : PF14159

PFam Domain Description : Domain of unknown function (DUF4308)

Number of Sequence in 50% Dataset : 32

Number of Sequence in Full Dataset : 156

Average sequence length: 86.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14159	D9PTQ2_CYAPA_119_167	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14159	Q3M8U4_ANAVT_815_921	100

Sequence based PCA Plot of the family - PF14159 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=1 Length=8
Motif2 Start=15 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay