3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14149

Details:

PFam ID : PF14149

PFam Domain Description : YhfH-like protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 31

Average sequence length: 35.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14149	D3FXV2_BACPE_1_37	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14149	D3FXV2_BACPE_1_37	100

Sequence based PCA Plot of the family - PF14149 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=27 Length=11
Motif2 Start=12 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay