3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14130

Details:

PFam ID : PF14130

PFam Domain Description : Domain of unknown function (DUF4297)

Number of Sequence in 50% Dataset : 59

Number of Sequence in Full Dataset : 75

Average sequence length: 197.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14130	B8PZW6_9BACT_24_210	96.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14130	C3AWC1_BACMY_12_229	100

Sequence based PCA Plot of the family - PF14130 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=31 Length=18
Motif2 Start=6 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay