3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14126

Details:

PFam ID : PF14126

PFam Domain Description : Domain of unknown function (DUF4293)

Number of Sequence in 50% Dataset : 42

Number of Sequence in Full Dataset : 106

Average sequence length: 142.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14126	D0JBI6_BLASB_2_129	97.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14126	D2QMQ6_SPILD_2_168	100

Sequence based PCA Plot of the family - PF14126 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=1 Length=17
Motif2 Start=156 Length=11
Motif3 Start=85 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay