3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14114

Details:

PFam ID : PF14114

PFam Domain Description : Domain of unknown function (DUF4286)

Number of Sequence in 50% Dataset : 39

Number of Sequence in Full Dataset : 74

Average sequence length: 95.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14114	E1X333_BACMS_4_86	52.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14114	Q54JF5_DICDI_9_116	100

Sequence based PCA Plot of the family - PF14114 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=28 Length=8
Motif2 Start=90 Length=8
Motif3 Start=1 Length=8
Motif4 Start=16 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay