3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14106

Details:

PFam ID : PF14106

PFam Domain Description : Domain of unknown function (DUF4279)

Number of Sequence in 50% Dataset : 60

Number of Sequence in Full Dataset : 89

Average sequence length: 112.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14106	A4EW30_9RHOB_1_99	61.0

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14106	E3GDW7_EUBLK_19_145	100

Sequence based PCA Plot of the family - PF14106 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=3 Length=37

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay