3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14086

Details:

PFam ID : PF14086

PFam Domain Description : Domain of unknown function (DUF4266)

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 72

Average sequence length: 49.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14086	A0QUB7_MYCS2_18_142	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14086	B7RXQ3_9GAMM_1_30	94.3

Sequence based PCA Plot of the family - PF14086 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=27 Length=8
Motif2 Start=1 Length=18
Motif3 Start=41 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay