3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14078

Details:

PFam ID : PF14078

PFam Domain Description : Domain of unknown function (DUF4259)

Number of Sequence in 50% Dataset : 57

Number of Sequence in Full Dataset : 106

Average sequence length: 120.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14078	B9WJT9_CANDC_2_157	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14078	C0WG24_9CORY_1_78	94.2

Sequence based PCA Plot of the family - PF14078 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=3 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay