3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14059

Details:

PFam ID : PF14059

PFam Domain Description : Domain of unknown function (DUF4251)

Number of Sequence in 50% Dataset : 34

Number of Sequence in Full Dataset : 85

Average sequence length: 141.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14059	A8UMI9_9FLAO_29_191	72.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14059	D7JDW7_9BACT_20_154	98.8

Sequence based PCA Plot of the family - PF14059 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=10 Length=8
Motif2 Start=1 Length=8
Motif3 Start=153 Length=8
Motif4 Start=70 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay