3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14056

Details:

PFam ID : PF14056

PFam Domain Description : Domain of unknown function (DUF4250)

Number of Sequence in 50% Dataset : 5

Number of Sequence in Full Dataset : 155

Average sequence length: 54.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14056	D1JW42_9BACE_8_94	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14056	D4F798_EDWTA_34_60	94.8

Sequence based PCA Plot of the family - PF14056 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=22 Length=8
Motif2 Start=40 Length=8
Motif3 Start=13 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay