3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14044

Details:

PFam ID : PF14044

PFam Domain Description : NETI protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 36

Average sequence length: 52.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14044	C3AUC4_BACMY_1_41	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14044	C3AUC4_BACMY_1_41	100

Sequence based PCA Plot of the family - PF14044 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=2 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay