3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF14018

Details:

PFam ID : PF14018

PFam Domain Description : Domain of unknown function (DUF4234)

Number of Sequence in 50% Dataset : 49

Number of Sequence in Full Dataset : 134

Average sequence length: 80.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14018	A3L613_PSEAE_26_89	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF14018	Q8TWD1_METKA_124_227	100

Sequence based PCA Plot of the family - PF14018 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=44 Length=8
Motif2 Start=14 Length=27

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay