3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13995

Details:

PFam ID : PF13995

PFam Domain Description : YebF-like protein

Number of Sequence in 50% Dataset : 9

Number of Sequence in Full Dataset : 41

Average sequence length: 83.0

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13995	D4BTC9_PRORE_31_118	50

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13995	E9YMW6_ECOLX_2_54	100

Sequence based PCA Plot of the family - PF13995 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay