3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13864

Details:

PFam ID : PF13864

PFam Domain Description : Calmodulin-binding

Number of Sequence in 50% Dataset : 54

Number of Sequence in Full Dataset : 139

Average sequence length: 95.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13864	A9SVA7_PHYPA_89_146	81.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13864	B4PDD7_DROYA_184_301	100

Sequence based PCA Plot of the family - PF13864 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay