3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13847

Details:

PFam ID : PF13847

PFam Domain Description : Methyltransferase domain

Number of Sequence in 50% Dataset : 1717

Number of Sequence in Full Dataset : 4793

Average sequence length: 155.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13847	B0MTM8_9BACT_431_627	97.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13847	B6YVZ8_THEON_1_114	99.9

Sequence based PCA Plot of the family - PF13847 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=75 Length=8
Motif2 Start=94 Length=8
Motif3 Start=30 Length=11
Motif4 Start=5 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay