3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13836

Details:

PFam ID : PF13836

PFam Domain Description : Domain of unknown function (DUF4195)

Number of Sequence in 50% Dataset : 6

Number of Sequence in Full Dataset : 22

Average sequence length: 160.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13836	B4CXF5_9BACT_30_186	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13836	B3KS93_HUMAN_47_219	100

Sequence based PCA Plot of the family - PF13836 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay