3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13827 Details: PFam ID : PF13827 PFam Domain Description : Domain of unknown function (DUF4189) Number of Sequence in 50% Dataset : 86 Number of Sequence in Full Dataset : 151 Average sequence length: 95.0 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13827E2NSX2_9FIRM_69_13296.4 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13827D5RKR2_9PROT_1_115100 Sequence based PCA Plot of the family - PF13827 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=50 Length=8Motif4 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF13827
PFam Domain Description : Domain of unknown function (DUF4189)
Number of Sequence in 50% Dataset : 86
Number of Sequence in Full Dataset : 151
Average sequence length: 95.0
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER