3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13799

Details:

PFam ID : PF13799

PFam Domain Description : Domain of unknown function (DUF4183)

Number of Sequence in 50% Dataset : 14

Number of Sequence in Full Dataset : 42

Average sequence length: 77.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13799	C3ED45_BACTU_20_114	61.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13799	C3ED45_BACTU_20_114	100

Sequence based PCA Plot of the family - PF13799 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=2 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay