3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13766

Details:

PFam ID : PF13766

PFam Domain Description : 2-enoyl-CoA Hydratase C-terminal region

Number of Sequence in 50% Dataset : 116

Number of Sequence in Full Dataset : 656

Average sequence length: 119.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13766	C4QH40_SCHMA_6730_7372	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13766	Q4P9Z2_USTMA_314_465	100

Sequence based PCA Plot of the family - PF13766 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=109 Length=8
Motif2 Start=89 Length=8
Motif3 Start=6 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay