3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13733

Details:

PFam ID : PF13733

PFam Domain Description : N-terminal region of glycosyl transferase group 7

Number of Sequence in 50% Dataset : 30

Number of Sequence in Full Dataset : 227

Average sequence length: 110.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13733	B4QU87_DROSI_51_111	75.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13733	E4YNV9_OIKDI_56_183	99.5

Sequence based PCA Plot of the family - PF13733 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=11 Length=8
Motif2 Start=26 Length=8
Motif3 Start=77 Length=8
Motif4 Start=98 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay