3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13732

Details:

PFam ID : PF13732

PFam Domain Description : Domain of unknown function (DUF4162)

Number of Sequence in 50% Dataset : 183

Number of Sequence in Full Dataset : 370

Average sequence length: 85.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13732	E1JPS3_9LACO_19_136	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13732	A3XGK8_LEEBM_214_315	100

Sequence based PCA Plot of the family - PF13732 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=19 Length=8
Motif2 Start=1 Length=17
Motif3 Start=72 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay