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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13669
Details:

PFam ID : PF13669

PFam Domain Description : Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

Number of Sequence in 50% Dataset : 221

Number of Sequence in Full Dataset : 922

Average sequence length: 113.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF13669B7ICY6_THEAB_7_6894.0
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF13669A2EFT0_TRIVA_4_110100
Sequence based PCA Plot of the family - PF13669 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=2 Length=17
Motif2 Start=83 Length=8
Motif3 Start=119 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay