3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13664

Details:

PFam ID : PF13664

PFam Domain Description : Domain of unknown function (DUF4149)

Number of Sequence in 50% Dataset : 105

Number of Sequence in Full Dataset : 305

Average sequence length: 101.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13664	D1C4M0_SPHTD_14_126	53.8

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13664	D6CU33_THIS3_9_140	94.4

Sequence based PCA Plot of the family - PF13664 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=2 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay