3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13659

Details:

PFam ID : PF13659

PFam Domain Description : Methyltransferase domain

Number of Sequence in 50% Dataset : 1100

Number of Sequence in Full Dataset : 4141

Average sequence length: 161.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13659	B9TF67_RICCO_175_317	97.7

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13659	E4ARI4_PROAC_97_206	96.6

Sequence based PCA Plot of the family - PF13659 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=27 Length=8
Motif2 Start=502 Length=8
Motif3 Start=421 Length=8
Motif4 Start=6 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay