3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13649

Details:

PFam ID : PF13649

PFam Domain Description : Methyltransferase domain

Number of Sequence in 50% Dataset : 247

Number of Sequence in Full Dataset : 569

Average sequence length: 102.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13649	C5PFE4_COCP7_60_160	92.6

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13649	A6EQI4_9BACT_67_152	90.6

Sequence based PCA Plot of the family - PF13649 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=20 Length=18
Motif2 Start=2 Length=17

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay