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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13643
Details:

PFam ID : PF13643

PFam Domain Description : Domain of unknown function (DUF4145)

Number of Sequence in 50% Dataset : 168

Number of Sequence in Full Dataset : 380

Average sequence length: 91.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF13643E6RJK1_PSEU9_5_96No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF13643A6CH10_9PLAN_105_214100
Sequence based PCA Plot of the family - PF13643 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=19 Length=8
Motif2 Start=10 Length=8
Motif3 Start=1 Length=8
Motif4 Start=86 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay