3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13643 Details: PFam ID : PF13643 PFam Domain Description : Domain of unknown function (DUF4145) Number of Sequence in 50% Dataset : 168 Number of Sequence in Full Dataset : 380 Average sequence length: 91.9 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13643E6RJK1_PSEU9_5_96No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13643A6CH10_9PLAN_105_214100 Sequence based PCA Plot of the family - PF13643 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=8Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=86 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF13643
PFam Domain Description : Domain of unknown function (DUF4145)
Number of Sequence in 50% Dataset : 168
Number of Sequence in Full Dataset : 380
Average sequence length: 91.9
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER