3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13561

Details:

PFam ID : PF13561

PFam Domain Description : Enoyl-(Acyl carrier protein) reductase

Number of Sequence in 50% Dataset : 1842

Number of Sequence in Full Dataset : 8506

Average sequence length: 225.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13561	C3B0L6_BACMY_1_62	91.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13561	D7FNC8_ECTSI_11_91	99.9

Sequence based PCA Plot of the family - PF13561 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=6 Length=8
Motif2 Start=26 Length=8
Motif3 Start=51 Length=18

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay