3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13513

Details:

PFam ID : PF13513

PFam Domain Description : HEAT-like repeat

Number of Sequence in 50% Dataset : 169

Number of Sequence in Full Dataset : 595

Average sequence length: 54.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13513	C6HYC7_9BACT_45_136	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13513	A9US41_MONBE_2_67	97.4

Sequence based PCA Plot of the family - PF13513 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay