3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13460 Details: PFam ID : PF13460 PFam Domain Description : NADH(P)-binding Number of Sequence in 50% Dataset : 1362 Number of Sequence in Full Dataset : 6088 Average sequence length: 186.4 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13460B9TQ90_RICCO_18_67No suitable BRS could be identified HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF13460Q04AC2_LACDB_1_12499.6 Sequence based PCA Plot of the family - PF13460 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=70 Length=8Motif2 Start=20 Length=11Motif3 Start=255 Length=8Motif4 Start=1 Length=11 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF13460
PFam Domain Description : NADH(P)-binding
Number of Sequence in 50% Dataset : 1362
Number of Sequence in Full Dataset : 6088
Average sequence length: 186.4
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER