3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13450

Details:

PFam ID : PF13450

PFam Domain Description : NAD(P)-binding Rossmann-like domain

Number of Sequence in 50% Dataset : 259

Number of Sequence in Full Dataset : 4387

Average sequence length: 64.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13450	Q2H5W0_CHAGB_35_102	98.4

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13450	F0Y5G9_9STRA_340_409	99.9

Sequence based PCA Plot of the family - PF13450 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay