3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13212

Details:

PFam ID : PF13212

PFam Domain Description : Domain of unknown function (DUF4020)

Number of Sequence in 50% Dataset : 7

Number of Sequence in Full Dataset : 17

Average sequence length: 168.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13212	E6V3E7_VARPD_35_143	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13212	Q2RKR8_MOOTA_981_1176	100

Sequence based PCA Plot of the family - PF13212 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=1 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay