3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13132

Details:

PFam ID : PF13132

PFam Domain Description : Domain of unknown function (DUF3950)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 16

Average sequence length: 28.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13132	C2Q6D8_BACCE_4_53	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13132	C6DAA0_PECCP_21_54	100

Sequence based PCA Plot of the family - PF13132 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay