3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13120

Details:

PFam ID : PF13120

PFam Domain Description : Domain of unknown function (DUF3974)

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 5

Average sequence length: 100.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13120	D3UGJ7_HELM1_8_126	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13120	C3ALN2_BACMY_1_126	100

Sequence based PCA Plot of the family - PF13120 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay