3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF13022

Details:

PFam ID : PF13022

PFam Domain Description : Helix-turn-helix of insertion element transposase

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 13

Average sequence length: 117.4

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13022	B1YEA0_EXIS2_174_213	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF13022	C6J0U9_9BACL_1_153	100

Sequence based PCA Plot of the family - PF13022 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay