3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12991

Details:

PFam ID : PF12991

PFam Domain Description : Domain of unknown function, B. Theta Gene description (DUF3875)

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 55

Average sequence length: 51.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12991	F2KVJ8_9BACT_344_418	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12991	C6ZAN4_9BACE_32_83	100

Sequence based PCA Plot of the family - PF12991 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay