3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12985

Details:

PFam ID : PF12985

PFam Domain Description : Domain of unknown function (DUF3869)

Number of Sequence in 50% Dataset : 12

Number of Sequence in Full Dataset : 16

Average sequence length: 104.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12985	C3QIN8_9BACE_2_115	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12985	E6SNP5_BACT6_24_143	100

Sequence based PCA Plot of the family - PF12985 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay