3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12984 Details: PFam ID : PF12984 PFam Domain Description : Domain of unknown function, B. Theta Gene description (DUF3868) Number of Sequence in 50% Dataset : 48 Number of Sequence in Full Dataset : 87 Average sequence length: 107.5 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12984C3QIN8_9BACE_2_11574.4 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12984C2MDI9_9PORP_1_121100 Sequence based PCA Plot of the family - PF12984 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 4 motifsMotif1 Start=19 Length=11Motif2 Start=10 Length=8Motif3 Start=1 Length=8Motif4 Start=39 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF12984
PFam Domain Description : Domain of unknown function, B. Theta Gene description (DUF3868)
Number of Sequence in 50% Dataset : 48
Number of Sequence in Full Dataset : 87
Average sequence length: 107.5
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER