3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12976

Details:

PFam ID : PF12976

PFam Domain Description : Domain of Unknown Function with PDB structure (DUF3860)

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 3

Average sequence length: 58.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12976	F2PFP6_PHOMO_1028_1174	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12976	B3T4J7_9ZZZZ_1_92	100

Sequence based PCA Plot of the family - PF12976 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay