3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12863

Details:

PFam ID : PF12863

PFam Domain Description : Domain of unknown function (DUF3821)

Number of Sequence in 50% Dataset : 23

Number of Sequence in Full Dataset : 23

Average sequence length: 203.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12863	A3CSY3_METMJ_31_222	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12863	Q2FML3_METHJ_25_276	100

Sequence based PCA Plot of the family - PF12863 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=2 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay