3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12803

Details:

PFam ID : PF12803

PFam Domain Description : mRNA (guanine-7-)methyltransferase (G-7-MTase)

Number of Sequence in 50% Dataset : 18

Number of Sequence in Full Dataset : 48

Average sequence length: 316.2

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12803	B1NLR9_9PARA_1498_1823	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12803	B1NLR9_9PARA_1498_1823	100

Sequence based PCA Plot of the family - PF12803 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 4 motifs

Motif1 Start=272 Length=17
Motif2 Start=3 Length=8
Motif3 Start=41 Length=8
Motif4 Start=306 Length=11

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay