3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12554

Details:

PFam ID : PF12554

PFam Domain Description : Mitotic-spindle organizing gamma-tubulin ring associated

Number of Sequence in 50% Dataset : 10

Number of Sequence in Full Dataset : 88

Average sequence length: 46.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12554	D7I723_PSESS_91_150	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12554	B4H5V6_DROPE_12_59	98.8

Sequence based PCA Plot of the family - PF12554 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay