3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12464

Details:

PFam ID : PF12464

PFam Domain Description : Maltose acetyltransferase

Number of Sequence in 50% Dataset : 127

Number of Sequence in Full Dataset : 824

Average sequence length: 54.3

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12464	C9K7B1_ALTAL_894_949	80.1

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12464	A2R268_ASPNC_27_97	100

Sequence based PCA Plot of the family - PF12464 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 3 motifs

Motif1 Start=10 Length=19
Motif2 Start=60 Length=11
Motif3 Start=1 Length=8

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay