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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12459
Details:

PFam ID : PF12459

PFam Domain Description : D-Ala-teichoic acid biosynthesis protein

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 68

Average sequence length: 41.9

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF12459E9CBW0_9EUKA_2_72No suitable BRS could be identified
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF12459D1WDG8_9LACO_1_3597.0
Sequence based PCA Plot of the family - PF12459 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay