3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12427

Details:

PFam ID : PF12427

PFam Domain Description : Branched-chain amino acid aminotransferase

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 8

Average sequence length: 21.8

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12427	F1ML69_BOVIN_390_454	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12427	A4QFR8_CORGB_3_37	100

Sequence based PCA Plot of the family - PF12427 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay