3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12397 Details: PFam ID : PF12397 PFam Domain Description : U3 small nucleolar RNA-associated protein 10 Number of Sequence in 50% Dataset : 56 Number of Sequence in Full Dataset : 120 Average sequence length: 120.8 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12397C4JR14_UNCRE_1_7138.1 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12397B0D7G9_LACBS_230_352100 Sequence based PCA Plot of the family - PF12397 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=1 Length=18Motif2 Start=21 Length=18 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF12397
PFam Domain Description : U3 small nucleolar RNA-associated protein 10
Number of Sequence in 50% Dataset : 56
Number of Sequence in Full Dataset : 120
Average sequence length: 120.8
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER