3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12355

Details:

PFam ID : PF12355

PFam Domain Description : Down syndrome cell adhesion molecule C terminal

Number of Sequence in 50% Dataset : 3

Number of Sequence in Full Dataset : 7

Average sequence length: 104

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12355	E9G1R5_DAPPU_47_193	100

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12355	E9G1R5_DAPPU_47_193	100

Sequence based PCA Plot of the family - PF12355 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay