3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12283

Details:

PFam ID : PF12283

PFam Domain Description : Bacteriophage protein K

Number of Sequence in 50% Dataset : 2

Number of Sequence in Full Dataset : 6

Average sequence length: 46.6

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12283	B8E277_DICTD_2_141	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12283	Q2LMD0_9VIRU_1_56	100

Sequence based PCA Plot of the family - PF12283 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay