3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12213

Details:

PFam ID : PF12213

PFam Domain Description : DNA polymerases epsilon N terminal

Number of Sequence in 50% Dataset : 21

Number of Sequence in Full Dataset : 41

Average sequence length: 69.5

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12213	Q45SQ7_CLODI_1_130	No suitable BRS could be identified

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12213	E9H864_DAPPU_1_74	100

Sequence based PCA Plot of the family - PF12213 :

BRP of Green color is by FASSM and of Red color is by HMMER

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay