3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12167

Details:

PFam ID : PF12167

PFam Domain Description : Domain of unknown function (DUF3596)

Number of Sequence in 50% Dataset : 33

Number of Sequence in Full Dataset : 158

Average sequence length: 84.1

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12167	A6GLA0_9BURK_1_44	62.5

HMMER Based Coverage Results:

Pfam ID	Best Profile	Coverage of Best Profile
PF12167	D4H416_DENA2_1_98	100

Sequence based PCA Plot of the family - PF12167 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 1 motifs

Motif1 Start=5 Length=36

Download PSSM/HMM Models/Alignment:

Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay