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3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12151
Details:

PFam ID : PF12151

PFam Domain Description : Mannan-binding protein

Number of Sequence in 50% Dataset : 4

Number of Sequence in Full Dataset : 30

Average sequence length: 36.7

Pairwise Identity of Sequence in 50% Dataset : 31.3

FASSM Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF12151Q12NL1_SHEDO_531_56966.6
HMMER Based Coverage Results:
Pfam IDBest ProfileCoverage of Best Profile
PF12151E6TCP9_MYCSR_23_60100
Sequence based PCA Plot of the family - PF12151 :

BRP of Green color is by FASSM and of Red color is by HMMER

PSIMOT-Motifs Extracted using PSIMOT:
There are 2 motifs

Motif1 Start=10 Length=27
Motif2 Start=1 Length=8
Download PSSM/HMM Models/Alignment:
Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)
Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay