3PFDB+ - Database of Best Representative Profiles of Protein Families : Database Entry - PF12151 Details: PFam ID : PF12151 PFam Domain Description : Mannan-binding protein Number of Sequence in 50% Dataset : 4 Number of Sequence in Full Dataset : 30 Average sequence length: 36.7 Pairwise Identity of Sequence in 50% Dataset : 31.3 FASSM Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12151Q12NL1_SHEDO_531_56966.6 HMMER Based Coverage Results:Pfam IDBest ProfileCoverage of Best ProfilePF12151E6TCP9_MYCSR_23_60100 Sequence based PCA Plot of the family - PF12151 : BRP of Green color is by FASSM and of Red color is by HMMER PSIMOT-Motifs Extracted using PSIMOT:There are 2 motifsMotif1 Start=10 Length=27Motif2 Start=1 Length=8 Download PSSM/HMM Models/Alignment:Prof. R. Sowdhamini (Contact : mini@ncbs.res.in)Agnel P. Joseph, Prashant N. Shingate, and Atul K. Upadhyay
PFam ID : PF12151
PFam Domain Description : Mannan-binding protein
Number of Sequence in 50% Dataset : 4
Number of Sequence in Full Dataset : 30
Average sequence length: 36.7
Pairwise Identity of Sequence in 50% Dataset : 31.3
BRP of Green color is by FASSM and of Red color is by HMMER